Protein ZmMYBR52
ZmMYBR52 is a protein in the MYB-related family.
Information
TF Name: ZmMYBR52
Species: Maize
TF Family: MYB-related
Gene Name(Synonym): MYBR52
Uniprot ID: C0HJ55
Subgenome: 1

Protein ZmMYBR52

ZmMYBR52 is a protein in the MYB-related family.

Overview of domains present in v5 transcripts
PF00249
Zm00001eb250940_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d017642DAPseq no logo sequence fimo position
Zm00001d017642DAPseq no logo sequence fimo position
Zm00001d017642ChIPseq no logo sequence fimo position
Zm00001d017642PChIPseq no logo sequence fimo position

Interactions where ZmMYBR52 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmMYBR52 is the target  
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There are 214 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb250940_T001 from maize genome v5

Amino Acid Sequence
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MATGETAVDRCKDPLGPRDMDLSGEEHVPKARKPYTITKQREKWTEDEHRRFLEALQMHGRAWRHIQEHIGTKTAVQIRS
HAQKFFTKVVRESSSGSNASAGAAPAIQVPPPRPKRKPAHPYPRKVDGAAKKPAPELKLMEKLPPRDRDEGSPTSVLASA
RTASRAEVLLGSAFANSSSASRSRGLSASGSDERGDGGGSLVSSVAGEHGCASPRTRAPYTKVLVEANEVSDLGPEAPVL
KLFGKKVVVKDLKTDYSPAAASVAKASRDRNPIGAAGASSWSPWPGSVQVQQLMYFVPQHDGLAAQPVAPWFGYSGSVPC
AVFYPQAVASAQEHQQASEPLDHKRAQTERSLTGSNMASSAASAAQNSDTAQSHHGPGQENTGDGCAALRAAIPRLAKCA
SSASCSGRGFVPYKRCAAESEAPRPVAPGEEDDGELTRLCL

MATGETAVDRCKDPLGPRDMDLSGEEHVPKARKPYTITKQREKWTEDEHRRFLEALQMHGRAWRHIQEHIGTKTAVQIRS
HAQKFFTKVVRESSSGSNASAGAAPAIQVPPPRPKRKPAHPYPRKVDGAAKKPAPELKLMEKLPPRDRDEGSPTSVLASA
RTASRAEVLLGSAFANSSSASRSRGLSASGSDERGDGGGSLVSSVAGEHGCASPRTRAPYTKVLVEANEVSDLGPEAPVL
KLFGKKVVVKDLKTDYSPAAASVAKASRDRNPIGAAGASSWSPWPGSVQVQQLMYFVPQHDGLAAQPVAPWFGYSGSVPC
AVFYPQAVASAQEHQQASEPLDHKRAQTERSLTGSNMASSAASAAQNSDTAQSHHGPGQENTGDGCAALRAAIPRLAKCA
SSASCSGRGFVPYKRCAAESEAPRPVAPGEEDDGELTRLCL

MATGETAVDRCKDPLGPRDMDLSGEEHVPKARKPYTITKQREKWTEDEHRRFLEALQMHGRAWRHIQEHIGTKTAVQIRS
HAQKFFTKVVRESSSGSNASAGAAPAIQVPPPRPKRKPAHPYPRKVDGAAKKPAPELKLMEKLPPRDRDEGSPTSVLASA
RTASRAEVLLGSAFANSSSASRSRGLSASGSDERGDGGGSLVSSVAGEHGCASPRTRAPYTKVLVEANEVSDLGPEAPVL
KLFGKKVVVKDLKTDYSPAAASVAKASRDRNPIGAAGASSWSPWPGSVQVQQLMYFVPQHDGLAAQPVAPWFGYSGSVPC
AVFYPQAVASAQEHQQASEPLDHKRAQTERSLTGSNMASSAASAAQNSDTAQSHHGPGQENTGDGCAALRAAIPRLAKCA
SSASCSGRGFVPYKRCAAESEAPRPVAPGEEDDGELTRLCL

MATGETAVDRCKDPLGPRDMDLSGEEHVPKARKPYTITKQREKWTEDEHRRFLEALQMHGRAWRHIQEHIGTKTAVQIRS
HAQKFFTKVVRESSSGSNASAGAAPAIQVPPPRPKRKPAHPYPRKVDGAAKKPAPELKLMEKLPPRDRDEGSPTSVLASA
RTASRAEVLLGSAFANSSSASRSRGLSASGSDERGDGGGSLVSSVAGEHGCASPRTRAPYTKVLVEANEVSDLGPEAPVL
KLFGKKVVVKDLKTDYSPAAASVAKASRDRNPIGAAGASSWSPWPGSVQVQQLMYFVPQHDGLAAQPVAPWFGYSGSVPC
AVFYPQAVASAQEHQQASEPLDHKRAQTERSLTGSNMASSAASAAQNSDTAQSHHGPGQENTGDGCAALRAAIPRLAKCA
SSASCSGRGFVPYKRCAAESEAPRPVAPGEEDDGELTRLCL

MATGETAVDRCKDPLGPRDMDLSGEEHVPKARKPYTITKQREKWTEDEHRRFLEALQMHGRAWRHIQEHIGTKTAVQIRS
HAQKFFTKVVRESSSGSNASAGAAPAIQVPPPRPKRKPAHPYPRKVDGAAKKPAPELKLMEKLPPRDRDEGSPTSVLASA
RTASRAEVLLGSAFANSSSASRSRGLSASGSDERGDGGGSLVSSVAGEHGCASPRTRAPYTKVLVEANEVSDLGPEAPVL
KLFGKKVVVKDLKTDYSPAAASVAKASRDRNPIGAAGASSWSPWPGSVQVQQLMYFVPQHDGLAAQPVAPWFGYSGSVPC
AVFYPQAVASAQEHQQASEPLDHKRAQTERSLTGSNMASSAASAAQNSDTAQSHHGPGQENTGDGCAALRAAIPRLAKCA
SSASCSGRGFVPYKRCAAESEAPRPVAPGEEDDGELTRLCL

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00249
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Nucleotide Sequence
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AAAGCATTCGGCATTCGGAACACAT...

GRMZM2G029850_T01 from maize genome v3

Amino Acid Sequence
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MGFPDILLQREFQVLVEANEVSDLGPEAPVLKLFGKKVVVKDLKTDYSPAAASVAKASRDRNPIGAAGASSWSPWPGSVQ
VQQLMYFVPQHDGLAAQPVAPWFGYSGSVPCAVFYPQAVASAQEHQQASEPLDHKRAQTERSLTGSNMASSAASAAQNSD
TAQSHHGPGQENTGDGCAALRAAIPRLAKCASSASCSGRGFVPYKRCAAESEAPRPVAPGEEDDGELTRLCL

Nucleotide Sequence
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GATATCTCTGGACCATTTAAATTAA...

GRMZM2G029850_T02 from maize genome v3


Related TFome: pUT5400

Amino Acid Sequence
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MATGETAVDRCKDPLGPRDMDLSGEEHVPKARKPYTITKQREKWTEDEHRRFLEALQMHGRAWRHIQEHIGTKTAVQIRS
HAQKFFTKVVRESSSGSNASAGAAPAIQVPPPRPKRKPAHPYPRKVDGAAKKPAPELKLMEKLPPRDRDEGSPTSVLASA
RTASRAEVLLGSAFANSSSASRSRGLSASGSDERGDGGGSLVSSVAGEHGCASPRTRAPYTKVLVEANEVSDLGPEAPVL
KLFGKKVVVKDLKTDYSPAAASVAKASRDRNPIGAAGASSWSPWPGSVQVQQLMYFVPQHDGLAAQPVAPWFGYSGSVPC
AVFYPQAVASAQEHQQASEPLDHKRAQTERSLTGSNMASSAASAAQNSDTAQSHHGPGQENTGDGCAALRAAIPRLAKCA
SSASCSGRGFVPYKRCAAESEAPRPVAPGEEDDGELTRLCL

Nucleotide Sequence
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CTCCCTCCTCTTGTCTATTCTTCTT...

Zm00001d017642_T001 from maize genome v4

Amino Acid Sequence
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MATGETAVDRCKDPLGPRDMDLSGEEHVPKARKPYTITKQREKWTEDEHRRFLEALQMHGRAWRHIQEHIGTKTAVQIRS
HAQKFFTKVVGADDDRQGLPTPFLMSELRRVCAKVVRESSSGSNASAGAAPAIQVPPPRPKRKPAHPYPRKVDGAAKKPA
PELKLMEKLPPRDRDEGSPTSVLASARTASRAEVLLGSAFANSSSASRSRGLSASGSDERGDGGGSLVSSVAGEHGCASP
RTRAPYTKVLVEANEVSDLGPEAPVLKLFGKKVVVKDLKTDYSPAAASVAKASRDRNPIGAAGASSWSPWPGSVQVQQLM
YFVPQHDGLAAQPVAPWFGYSGSVPCAVFYPQAVASAQEHQQASEPLDHKRAQTERSLTGSNMASSAASAAQNSDTAQSH
HGPGQENTGDGCAALRAAIPRLAKCASSASCSGRGFVPYKRCAAESEAPRPVAPGEEDDGELTRLCL

Nucleotide Sequence
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AAAGCATTCGGCATTCGGAACACAT...

Zm00001d017642_T002 from maize genome v4

Amino Acid Sequence
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MATGETAVDRCKDPLGPRDMDLSGEEHVPKARKPYTITKQREKWTEDEHRRFLEALQMHGRAWRHIQEHIGTKTAVQIRS
HAQKFFTKVVRESSSGSNASAGAAPAIQVPPPRPKRKPAHPYPRKVDGAAKKPAPELKLMEKLPPRDRDEGSPTSVLASA
RTASRAEVLLGSAFANSSSASRSRGLSASGSDERGDGGGSLVSSVAGEHGCASPRTRAPYTKVLVEANEVSDLGPEAPVL
KLFGKKVVVKDLKTDYSPAAASVAKASRDRNPIGAAGASSWSPWPGSVQVQQLMYFVPQHDGLAAQPVAPWFGYSGSVPC
AVFYPQAVASAQEHQQASEPLDHKRAQTERSLTGSNMASSAASAAQNSDTAQSHHGPGQENTGDGCAALRAAIPRLAKCA
SSASCSGRGFVPYKRCAAESEAPRPVAPGEEDDGELTRLCL

Nucleotide Sequence
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AAAGCATTCGGCATTCGGAACACAT...


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